The Bloom and Bust Biochemistry of Diatoms
Adrian Marchetti, David Schruth and co-authors recently published a Comparative metatranscriptomics paper in PNAS exploring potential diatom metabolic adaptations to intermittent iron availability.
The Bloom and Bust Biochemistry of Diatoms
Adrian Marchetti, David Schruth and co-authors recently published a Comparative metatranscriptomics paper in PNAS exploring potential diatom metabolic adaptations to intermittent iron availability.
SeaFlow: A Novel Underway Flow Cytometer
Jarred Swalwell and co-authors recently published a paper in L&O:Methods describing their novel underway flow cytometer called SeaFlow. Link to the paper
The urea cycle in diatoms
Sara Bender et al. recently published a study examining the role of the urea cycle in the model diatom Thalassiosira pseudonana. The article is currently in press and can be accessed (with subscription) through Protist Online
flowPhyto
David Schruth & Francois Ribalet recently published a paper in the journal 'Bioinformatics' detailing their new Bioconductor package 'flowPhyto'.
pplacer: a new way to analyze short sequences
pplacer, new phylogenetic software for analyzing short, non overlapping sequence has developed out of a collaboration between Robin Kodner and Erick Matsen (FHCRC) in the Armbrust Lab. Its perfect for next-gen sequence reads , non-overlapping sequence fragments, and/or analyzing thousands to tens of thousands of sequences on a fixed reference trees is now available and the paper is in press!
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